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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885486.1_cds_XP_016439500.1_35048
CDS Infomation

[gene=LOC107765377] [db_xref=GeneID:107765377] [protein=heat shock 70 kDa protein 16-like] [protein_id=XP_016439500.1] [location=join(68900..69359,69822..70105,71675..71887,74017..74112,74228..74296,78610..78810,79370..79516,79612..79740,79823..79953,81570..81675)] [gbkey=CDS]
Sequence

ATGAGTGTAGTTGGGTTTGATGTTGGAAATGAAAACTGTGTTATAGCATTTGCAAAGCAA
CGTGGCATTGATGTAATATTAAACGATGAATCGAAACGAGAGACGCCGGCAGTGGTGTCA
TTTGGTGAGAAGCAAAGGTTCATTGGCTCGGCTGGAGCTGCATCGGCCACTATGAACCCG
AAATCAACTATTTCGCAGGTTAAGAGGTTGATTGGTAGGAAATATAGGGAGCCTGCTGTT
CAGATGGACCTGAAATTGCTTCCATTCGCGACCTCTGAGGGACCAGATGGTGGCATTTTG
ATTCATTTGCAGTACATGAATGAGAAGCAGAGTTTCACTCCTGTTCAGATTATGGCAATG
CTATTTGCACATTTGAAGCAGATTGCTGAGAAGAATCTTGAAATGGATGTTTCGGATTGC
GTTATTGGCATACCTTCGTACTTCACTGATTTACAGAGACAAGATACGAAGGAATNGGAC
TTTGAGAAGCTTTCATCAGATTTATTGGAGAAGATAAGCATTCCTTGTCGTAAAGCTTTG
CTTGATTCTGGTTTGACTGCTGACAGGATTCATACTCTTGAGCTTGTAGGATCAGGCTCT
AGAATTCCAGCTGTAGGAAGAATTTTAAATTCGCTATTCAGAAAAGAACCTGGGCGGACA
ATAAATGCTAGTGAGTGTGTTGCACGTGGATGTGCTCTTCAATGTGCAATGCTCAGCCCT
ATATTTCGTGTTAGAGAATACGAGGTTCAGGATTCATTTCCTTTCTCCATTGGATTTGCA
TCTGATGAGGGCCCAGTTTGCACCCTATCAAATGGCATATTGTTTCCAAAGGGCCATAGT
TTTCCAAGCATGAAAGTGCTCACATTGCATAGGAGCAGCTGTTTCAACTTGGAGGCTTTC
TACACTAACCAGAATGAGTTGCCACCAGGTGTATCCGATAAAATAAGCAAATCTACGATT
GGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGATTAAAGTCAAAATTCAATTGAAC
CTCCATGGAATTGTTACGGTAGAATCGGCCTGGCTGATCAAAGATCAAACAAGTCATTCT
ACTTCGGAAAATAATACTGATACTCATGCAGAAGATATGGAGGGAGATGATACAAGAAAA
AGTAAGGCCGTTAAGAGGCAGGATATACCTGTCAGTGAAAGTGTCAATGGTGGAATGACC
TTGGCGGAGCTATCCCAAGCTCAGGAAAAGGAATGCCAGTTAGCTGAGCAAGACATAAAG
GTGGAGCGAACTAAAGATAAGAAAAACACCCTGGAGGCATACGTCTATGAAACTCGTAAT
AAGCTTTTGAATACATACCGGAGCTTTGCTACGGATTCGGAGAGGGAGGGTATCTCATGT
AATCTACAGCAGACTGAAGAATGGCTCTATGAAGATGGAGATGATGAGTCTGAACATGTC
TATGCGGAGAAGCTAGATGATCTTAAAAAGATGGTGGATCCCGTGGAGAATCGATACAAG
GAAGAAGAGGCGCGGGCACAAGCAACACGAAATCTATTAAATAGCATTGTGGAATACCGG
ATGGCTGCAGGATCACTTGCAGCCAGTGAGAAAGACGCCGTCATTAACGAATGCCATAAA
GCAGAGCAATGGCTCCGAGAGAAATCCCATCAGCAGGAGGCACTGCCAAGAAATGCTGAT
CCAGTACTGTGGTCTAGTGAAATCAAAAGAAAGACAGAGGCTTTTGAAGCGATGTGCAAG
CATGTAATGAGGCACAAGTCATCTCCCCAAAAAACTGAAGATGGTTCAGGCTCGGATCCC
AGAAGTAAAAGGGAGGATGACATGGATGTTGATTAA

Peptide Sequence

PEP ID

XP_016439500.1
PEP Infomation

PREDICTED: heat shock 70 kDa protein 16-like [Nicotiana tabacum]
Sequence

MSVVGFDVGNENCVIAFAKQRGIDVILNDESKRETPAVVSFGEKQRFIGSAGAASATMNP
KSTISQVKRLIGRKYREPAVQMDLKLLPFATSEGPDGGILIHLQYMNEKQSFTPVQIMAM
LFAHLKQIAEKNLEMDVSDCVIGIPSYFTDLQRQDTKEXDFEKLSSDLLEKISIPCRKAL
LDSGLTADRIHTLELVGSGSRIPAVGRILNSLFRKEPGRTINASECVARGCALQCAMLSP
IFRVREYEVQDSFPFSIGFASDEGPVCTLSNGILFPKGHSFPSMKVLTLHRSSCFNLEAF
YTNQNELPPGVSDKISKSTIGPFQVPHSEKAKIKVKIQLNLHGIVTVESAWLIKDQTSHS
TSENNTDTHAEDMEGDDTRKSKAVKRQDIPVSESVNGGMTLAELSQAQEKECQLAEQDIK
VERTKDKKNTLEAYVYETRNKLLNTYRSFATDSEREGISCNLQQTEEWLYEDGDDESEHV
YAEKLDDLKKMVDPVENRYKEEEARAQATRNLLNSIVEYRMAAGSLAASEKDAVINECHK
AEQWLREKSHQQEALPRNADPVLWSSEIKRKTEAFEAMCKHVMRHKSSPQKTEDGSGSDP
RSKREDDMDVD

Transcript Sequence

Gene sequence data has not been registered.